BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B02SP1|AL426636
(684 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1376 1351 0.0
>3x_Contig1376
Length = 7449
Score = 1351 bits (681), Expect = 0.0
Identities = 682/683 (99%)
Strand = Plus / Plus
Query: 2 ttctattcaagtattcagcatcatccgtaagttgacttttgctgtaatcaaaactcttat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2153 ttctattcaagtattcagcatcatccgtaagttgacttttgctgtaatcaaaactcttat 2212
Query: 62 ctatctggacagcaagtaacttttccctctcttcagttaacttggataagttgacattaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2213 ctatctggacagcaagtaacttttccctctcttcagttaacttggataagttgacattaa 2272
Query: 122 cctggaacaaagtgtcaggagcagcgaatgttttcctttcaagttgttcctctattcgat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2273 cctggaacaaagtgtcaggagcagcgaatgttttcctttcaagttgttcctctattcgat 2332
Query: 182 tccttttgtttcgtctggtcatatcagatgcgtcagggatatccagccagtcttgctcag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2333 tccttttgtttcgtctggtcatatcagatgcgtcagggatatccagccagtcttgctcag 2392
Query: 242 aaagagttgctaaattacgcttcaaatctacaaatttagaagatagcttgtctggttcat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2393 aaagagttgctaaattacgcttcaaatctacaaatttagaagatagcttgtctggttcat 2452
Query: 302 catctggcttcgtctttaggcttgtttcattgtcgataatttttttattcttaagtcgct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2453 catctggcttcgtctttaggcttgtttcattgtcgataatttttttattcttaagtcgct 2512
Query: 362 gttcgatcttttcgtacactctcatctcttgttcgtcttcatctttaacctgtttctccg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2513 gttcgatcttttcgtacactctcatctcttgttcgtcttcatctttaacctgtttctccg 2572
Query: 422 atgattcattcgaaactgctgatctgtatctatttggattctttgttacagaagtatctg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2573 atgattcattcgaaactgctgatctgtatctatttggattctttgttacagaagtatctg 2632
Query: 482 gtgcatctcgcccatatctattcaatctagcaggaactcttttatcatctttacwtcctc 541
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2633 gtgcatctcgcccatatctattcaatctagcaggaactcttttatcatctttacttcctc 2692
Query: 542 tggtggaaaagccaaccgctccacgacctataccagcgatgtaaccaggtggtggagatt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2693 tggtggaaaagccaaccgctccacgacctataccagcgatgtaaccaggtggtggagatt 2752
Query: 602 gttttaggaaactgggagtctccatgcctatcaccgtgatagttgtttactcagatgatt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2753 gttttaggaaactgggagtctccatgcctatcaccgtgatagttgtttactcagatgatt 2812
Query: 662 tactagtgaatagtttactgtat 684
|||||||||||||||||||||||
Sbjct: 2813 tactagtgaatagtttactgtat 2835
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5113
Number of Sequences: 1807
Number of extensions: 5113
Number of successful extensions: 127
Number of sequences better than 1.0e-20: 1
length of query: 684
length of database: 10,358,551
effective HSP length: 16
effective length of query: 668
effective length of database: 10,329,639
effective search space: 6900198852
effective search space used: 6900198852
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)